STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
megf11Multiple EGF-like-domains 11. (1132 aa)    
Predicted Functional Partners:
il1b
Interleukin-1.
    
 0.678
LOC110962974
Uncharacterized protein.
    
 0.675
LAMA2
Laminin subunit alpha 2.
    
 
0.674
tnfrsf13b
TNFR-Cys domain-containing protein.
    
 0.667
LOC110946044
Uncharacterized protein.
   
  0.661
ENSAPOP00000022883
Uncharacterized protein.
    
  0.655
ENSAPOP00000022917
Uncharacterized protein.
    
  0.655
gulp1
GULP PTB domain containing engulfment adaptor 1a.
   
 
 0.618
itgb4
Integrin beta.
   
 0.613
ENSAPOP00000011830
RP1 axonemal microtubule associated.
   
 0.607
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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