ENSAPOP00000006536 protein (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPOP00000006536

Uncharacterized protein. (358 aa)

Predicted Functional Partners:

tsc2

0.995

LOC110958564

0.994

ENSAPOP00000005647

0.990

mtor

0.977

LOC110949199

0.971

stip1

0.970

LOC110963555

0.965

LOC110968352

0.965

LOC110966339

0.959

akt1

0.959

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000005647	ENSAPOP00000006536	ENSAPOP00000005647	ENSAPOP00000006536	Uncharacterized protein.	Uncharacterized protein.	0.990
ENSAPOP00000005647	LOC110949199	ENSAPOP00000005647	ENSAPOP00000029465	Uncharacterized protein.	Ras homolog, mTORC1 binding like 1.	0.986
ENSAPOP00000005647	LOC110958564	ENSAPOP00000005647	ENSAPOP00000025409	Uncharacterized protein.	TBC1 domain family, member 7.	0.995
ENSAPOP00000005647	LOC110963555	ENSAPOP00000005647	ENSAPOP00000002869	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSAPOP00000005647	LOC110966339	ENSAPOP00000005647	ENSAPOP00000026056	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.959
ENSAPOP00000005647	LOC110968352	ENSAPOP00000005647	ENSAPOP00000022169	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSAPOP00000005647	akt1	ENSAPOP00000005647	ENSAPOP00000027352	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.959
ENSAPOP00000005647	mtor	ENSAPOP00000005647	ENSAPOP00000012910	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.979
ENSAPOP00000006536	ENSAPOP00000005647	ENSAPOP00000006536	ENSAPOP00000005647	Uncharacterized protein.	Uncharacterized protein.	0.990
ENSAPOP00000006536	LOC110949199	ENSAPOP00000006536	ENSAPOP00000029465	Uncharacterized protein.	Ras homolog, mTORC1 binding like 1.	0.971
ENSAPOP00000006536	LOC110958564	ENSAPOP00000006536	ENSAPOP00000025409	Uncharacterized protein.	TBC1 domain family, member 7.	0.994
ENSAPOP00000006536	LOC110963555	ENSAPOP00000006536	ENSAPOP00000002869	Uncharacterized protein.	Uncharacterized protein.	0.965
ENSAPOP00000006536	LOC110966339	ENSAPOP00000006536	ENSAPOP00000026056	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.959
ENSAPOP00000006536	LOC110968352	ENSAPOP00000006536	ENSAPOP00000022169	Uncharacterized protein.	Uncharacterized protein.	0.965
ENSAPOP00000006536	akt1	ENSAPOP00000006536	ENSAPOP00000027352	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.959
ENSAPOP00000006536	mtor	ENSAPOP00000006536	ENSAPOP00000012910	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.977
ENSAPOP00000006536	stip1	ENSAPOP00000006536	ENSAPOP00000029231	Uncharacterized protein.	Stress-induced phosphoprotein 1.	0.970
ENSAPOP00000006536	tsc2	ENSAPOP00000006536	ENSAPOP00000006638	Uncharacterized protein.	TSC complex subunit 2.	0.995
LOC110949199	ENSAPOP00000005647	ENSAPOP00000029465	ENSAPOP00000005647	Ras homolog, mTORC1 binding like 1.	Uncharacterized protein.	0.986
LOC110949199	ENSAPOP00000006536	ENSAPOP00000029465	ENSAPOP00000006536	Ras homolog, mTORC1 binding like 1.	Uncharacterized protein.	0.971