Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110962233Procollagen C-endopeptidase enhancer a. (483 aa)    
Predicted Functional Partners:
ENSAPOP00000003575
Amnion associated transmembrane protein.
   
 0.885
LOC110971869
Transcobalamin II.
    
 0.802
LOC110955060
Metalloendopeptidase.
    
 0.798
LOC110959029
Metalloendopeptidase.
    
 0.798
aig1
Androgen-induced 1 (H. sapiens).
   
 
 0.748
ENSAPOP00000007180
Collagen, type XXII, alpha 1.
    
 0.740
LOC110957693
Metalloendopeptidase.
    
 0.736
paqr5
Progestin and adipoQ receptor family member Va.
      
 0.671
vhl
Von Hippel-Lindau tumor suppressor.
      
 0.594
smg5
SMG5 nonsense mediated mRNA decay factor.
      
 0.576
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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