Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbx4T-box transcription factor 4. (544 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
   
 0.956
yap1
Yes-associated protein 1.
    
 0.766
nppa
Uncharacterized protein.
    
 0.723
pitx1
Homeobox protein.
    
 
 0.719
hand2
Heart and neural crest derivatives expressed 2.
    
 0.686
hoxb4
Homeobox B4a.
    
 
 0.671
tspan1
Tetraspanin.
      
 0.654
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
     
 0.641
LOC110961875
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
     
 0.641
LOC110954381
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.641
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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