Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpatch4G patch domain containing 4. (396 aa)    
Predicted Functional Partners:
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.983
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
   0.980
surf6
Surfeit 6.
   
   0.962
ebna1bp2
EBNA1 binding protein 2.
   
   0.957
rpf2
Ribosome production factor 2 homolog.
   
 
 0.955
ddx27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
   0.955
pum3
Pumilio RNA-binding family member 3.
   
   0.951
ngdn
Neuroguidin, EIF4E binding protein.
   
   0.950
rbm28
RNA binding motif protein 28.
   
   0.949
mybbp1a
MYB binding protein (P160) 1a.
   
 
 0.948
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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