Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948798Uncharacterized protein. (1650 aa)    
Predicted Functional Partners:
LOC110950264
Neuroligin 1.
    
 0.946
LOC110962231
Neuroligin 2b.
    
 0.932
LOC110946858
Neuroligin 3b.
    
 0.914
nlgn3
Neuroligin 3a.
    
 0.914
ENSAPOP00000010678
COesterase domain-containing protein.
    
 0.906
ENSAPOP00000011234
Neuroligin 4 X-linked a.
    
 0.906
LOC110952574
COesterase domain-containing protein.
    
 0.906
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.841
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.841
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
    
 0.714
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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