casc3 protein (Acanthochromis polyacanthus) - STRING interaction network

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[Homology]

Score

casc3

Casc3 exon junction complex subunit. (765 aa)

Predicted Functional Partners:

eif4a3

0.999

rbm8a

0.998

UPF2

0.998

magoh

0.995

UPF1

0.985

LOC110950706

0.985

pym1

0.985

upf3b

0.979

upf3a

0.968

pnn

0.964

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110950706	UPF1	ENSAPOP00000020196	ENSAPOP00000008674	Uncharacterized protein.	UPF1 RNA helicase and ATPase.	0.873
LOC110950706	UPF2	ENSAPOP00000020196	ENSAPOP00000029695	Uncharacterized protein.	UPF2 regulator of nonsense mediated mRNA decay.	0.996
LOC110950706	casc3	ENSAPOP00000020196	ENSAPOP00000006620	Uncharacterized protein.	Casc3 exon junction complex subunit.	0.985
LOC110950706	eif4a3	ENSAPOP00000020196	ENSAPOP00000030480	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.986
LOC110950706	magoh	ENSAPOP00000020196	ENSAPOP00000013325	Uncharacterized protein.	Mago homolog, exon junction complex subunit.	0.962
LOC110950706	pnn	ENSAPOP00000020196	ENSAPOP00000025356	Uncharacterized protein.	Pinin, desmosome associated protein.	0.465
LOC110950706	pym1	ENSAPOP00000020196	ENSAPOP00000034049	Uncharacterized protein.	PYM homolog 1, exon junction complex associated factor.	0.513
LOC110950706	rbm8a	ENSAPOP00000020196	ENSAPOP00000007700	Uncharacterized protein.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.982
LOC110950706	upf3a	ENSAPOP00000020196	ENSAPOP00000010976	Uncharacterized protein.	UPF3A regulator of nonsense mediated mRNA decay.	0.988
LOC110950706	upf3b	ENSAPOP00000020196	ENSAPOP00000010351	Uncharacterized protein.	UPF3B regulator of nonsense mediated mRNA decay.	0.990
UPF1	LOC110950706	ENSAPOP00000008674	ENSAPOP00000020196	UPF1 RNA helicase and ATPase.	Uncharacterized protein.	0.873
UPF1	UPF2	ENSAPOP00000008674	ENSAPOP00000029695	UPF1 RNA helicase and ATPase.	UPF2 regulator of nonsense mediated mRNA decay.	0.996
UPF1	casc3	ENSAPOP00000008674	ENSAPOP00000006620	UPF1 RNA helicase and ATPase.	Casc3 exon junction complex subunit.	0.985
UPF1	eif4a3	ENSAPOP00000008674	ENSAPOP00000030480	UPF1 RNA helicase and ATPase.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.986
UPF1	magoh	ENSAPOP00000008674	ENSAPOP00000013325	UPF1 RNA helicase and ATPase.	Mago homolog, exon junction complex subunit.	0.962
UPF1	pnn	ENSAPOP00000008674	ENSAPOP00000025356	UPF1 RNA helicase and ATPase.	Pinin, desmosome associated protein.	0.465
UPF1	pym1	ENSAPOP00000008674	ENSAPOP00000034049	UPF1 RNA helicase and ATPase.	PYM homolog 1, exon junction complex associated factor.	0.513
UPF1	rbm8a	ENSAPOP00000008674	ENSAPOP00000007700	UPF1 RNA helicase and ATPase.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.982
UPF1	upf3a	ENSAPOP00000008674	ENSAPOP00000010976	UPF1 RNA helicase and ATPase.	UPF3A regulator of nonsense mediated mRNA decay.	0.988
UPF1	upf3b	ENSAPOP00000008674	ENSAPOP00000010351	UPF1 RNA helicase and ATPase.	UPF3B regulator of nonsense mediated mRNA decay.	0.990