Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968743Uncharacterized protein. (494 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.907
lef1
Lymphoid enhancer-binding factor 1.
    
 0.886
LOC110949074
Transcription factor 7.
    
 0.877
LOC110952597
SRY-box transcription factor 32.
   
 
 0.874
LOC110966381
POU domain protein.
    
 0.839
tcf7l2
Transcription factor 7 like 2.
    
 0.788
LOC110953630
Transcription factor 7 like 1b.
    
 0.788
ENSAPOP00000019455
CTNNB1_binding domain-containing protein.
    
 0.788
LOC110948036
Uncharacterized protein.
    
 0.726
prdm1
PR domain containing 1a, with ZNF domain.
    
 0.726
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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