Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mttpMicrosomal triglyceride transfer protein. (887 aa)    
Predicted Functional Partners:
apob
Apolipoprotein Ba.
   
 0.973
ENSAPOP00000010570
Vitellogenin domain-containing protein.
   
 0.973
ENSAPOP00000010656
Uncharacterized protein.
   
 0.973
ENSAPOP00000027978
Vitellogenin domain-containing protein.
   
 0.973
ENSAPOP00000028135
Vitellogenin domain-containing protein.
   
 0.973
p4hb
Protein disulfide-isomerase.
    
 0.921
LOC110958780
Protein disulfide-isomerase.
    
 0.921
LOC110970448
Vitellogenin 3, phosvitinless.
   
 0.891
LOC110967804
Uncharacterized protein.
   
 0.891
LOC110967798
Uncharacterized protein.
   
 0.891
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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