Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
sft2d3Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (218 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.861
dusp28
Dual specificity phosphatase 28.
      
 0.681
LOC110969503
Si:dkey-69o16.5.
      
 0.678
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
   0.673
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 
 0.660
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.652
WDR33
WD repeat domain 33.
      
 0.626
adhfe1
Alcohol dehydrogenase iron containing 1.
      
 0.603
LOC110963065
C1q domain-containing protein.
      
 0.602
LOC110968826
Golgi transport 1A.
   
 
 0.559
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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