STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sft2d3Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (218 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.628
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 
 0.602
LOC110968826
Golgi transport 1A.
   
 
 0.586
GOLT1B
Golgi transport 1Ba.
   
 
 0.586
LOC110967406
Golgi transport 1Bb.
   
 
 0.586
dusp28
Dual specificity phosphatase 28.
      
 0.491
LOC110969503
Si:dkey-69o16.5.
      
 0.473
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.457
ENSAPOP00000009107
Component of oligomeric golgi complex 1.
      
 0.428
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.408
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.