Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000006732C1q domain-containing protein. (372 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.735
ENSAPOP00000028898
Uncharacterized protein.
    
  0.735
ENSAPOP00000032201
Procollagen, type IX, alpha 2.
  
  
 
0.650
pla2g4a
Phospholipase A2.
     
  0.607
ENSAPOP00000005477
Uncharacterized protein.
  
     0.531
ENSAPOP00000016008
PDZ domain-containing protein.
     
  0.468
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.468
LOC110948570
Epiphycan.
    
 
 0.464
colec11
Collectin sub-family member 11.
  
 
  0.437
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.437
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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