Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN2CASK interacting protein 2. (1330 aa)    
Predicted Functional Partners:
nck2
Cytoplasmic protein.
    
 0.881
nck1
Cytoplasmic protein.
    
 0.881
LOC110951980
Abl-interactor 1b.
    
 
 0.770
ABI1
Abl-interactor 1a.
    
 
 0.770
p4ha3
Prolyl 4-hydroxylase, alpha polypeptide III.
    
   0.766
tln2
Talin 2b.
    
  0.713
LOC110961362
Talin 2a.
    
  0.713
tlnrd1
Talin rod domain containing 1.
    
  0.713
LOC110963287
Talin 1.
    
  0.713
tmem94
Transmembrane protein 94.
   
  
 0.696
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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