STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110946209Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.703
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.687
LOC110964063
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.681
ENSAPOP00000012600
Si:ch211-38m6.7.
     
 0.627
LOC110957124
Si:dkey-21e5.1.
     
 0.561
LOC110958237
Uncharacterized protein.
     
 0.561
KCNT1
Potassium channel, subfamily T, member 1.
     
 0.561
LOC110956403
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
     
 0.561
ENSAPOP00000005397
Uncharacterized protein.
   
   0.512
prkca
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
  0.511
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.