STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970633Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (890 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.986
LOC110957012
Uncharacterized protein.
   
 0.950
LOC110960392
Junction plakoglobin a.
   
 0.935
ENSAPOP00000026172
Uncharacterized protein.
   
 0.934
CTNND1
Catenin delta 1.
    
 0.845
LOC110953499
Catenin (cadherin-associated protein), delta 1.
    
 0.845
ARVCF
ARVCF delta catenin family member b.
    
 0.845
LOC110964870
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.840
rapgef1
Rap guanine nucleotide exchange factor (GEF) 1b.
     
 0.820
LOC110949986
Uncharacterized protein.
    
 0.806
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.