Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hddc3HD domain containing 3. (179 aa)    
Predicted Functional Partners:
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
  0.929
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.911
LOC110955132
NDK domain-containing protein; Belongs to the NDK family.
    
 0.898
nme4
Nucleoside diphosphate kinase.
    
 0.898
ENSAPOP00000016736
NDK domain-containing protein.
    
 0.898
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 0.898
nme3
Nucleoside diphosphate kinase.
    
 0.898
LOC110969142
Guanylate kinase 1b.
  
 
 0.897
LOC110964449
Guanylate kinase 1a.
  
 
 0.897
prune1
Prune exopolyphosphatase.
     
 0.895
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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