STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ralgapa1Ral GTPase activating protein, alpha subunit 1 (catalytic). (2250 aa)    
Predicted Functional Partners:
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
   
0.796
ENSAPOP00000016579
Uncharacterized protein.
   
 0.796
ENSAPOP00000024705
Ras homolog family member H.
    
  0.689
rhoq
Ras homolog family member Q.
    
  0.689
fam91a1
Family with sequence similarity 91 member A1.
     
 0.685
afdn
Afadin, adherens junction formation factor a.
    
 0.610
ENSAPOP00000005758
Ras homolog gene family, member Gd.
    
 0.567
LOC110965833
Ras homolog family member Gb.
    
 0.567
LOC110953021
V-ral simian leukemia viral oncogene homolog Ba (ras related).
    
 0.560
LOC110968902
Uncharacterized protein.
    
 0.560
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.