STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdm3bLysine (K)-specific demethylase 3B. (1799 aa)    
Predicted Functional Partners:
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.824
PPARA
Peroxisome proliferator-activated receptor alpha b.
    
 0.824
LOC110955445
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
     
 0.819
LOC110968631
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.812
LOC110970438
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 0.812
smarcd1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
     
 0.780
smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
     
 0.780
LOC110953589
Peroxisome proliferator-activated receptor alpha a.
    
 0.765
LOC110957003
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
   
 
 0.725
smarcc1
Uncharacterized protein.
   
 
 0.725
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.