STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110946200Clusterin; Belongs to the clusterin family. (465 aa)    
Predicted Functional Partners:
LOC110947917
Opsin 1 (cone pigments), short-wave-sensitive 2.
   
    0.818
LOC110958693
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
    0.818
rbp3
Retinol binding protein 3.
   
  
 0.787
ENSAPOP00000017015
Interphotoreceptor retinoid-binding protein like.
   
  
 0.787
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.647
LOC110946044
Uncharacterized protein.
   
 0.619
LOC110952342
Amyloid beta (A4) precursor protein b.
    
 0.559
LOC110952207
Amyloid beta precursor protein.
    
 0.559
podxl2
Uncharacterized protein.
    
 0.542
ENSAPOP00000027675
BPTI/Kunitz inhibitor domain-containing protein.
    
 0.542
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.