Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcnx3Pecanex 3. (2281 aa)    
Predicted Functional Partners:
LOC110962013
Mitogen-activated protein kinase kinase kinase.
   
  
 0.717
LTBP3
Latent transforming growth factor beta binding protein 3.
    
 
 0.628
KLHL28
Kelch like family member 28.
    
 
 0.562
gpha2
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.523
preb
Prolactin regulatory element binding.
      
 0.494
allc
Allantoicase.
      
 0.494
fam89b
Family with sequence similarity 89 member B.
      
 0.466
klhl20
Kelch-like family member 20.
    
 
 0.427
ENSAPOP00000018371
Si:ch73-29c22.1.
    
 
 0.427
rnaseh2c
Ribonuclease H2, subunit C.
      
 0.417
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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