STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf115Ring finger protein 115. (315 aa)    
Predicted Functional Partners:
rspo1
R-spondin 1.
    
 0.885
ENSAPOP00000001606
R-spondin 2.
    
 0.824
LOC110948733
R-spondin 3.
    
 0.823
rps27a
Ribosomal protein S27a.
    
 0.820
LOC110966765
Ubiquitin-like domain-containing protein.
    
 0.779
LOC110947201
Ubiquitin-like.
    
 0.779
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.779
LOC110965382
Uncharacterized protein.
    
  0.777
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
  0.763
LOC110954579
BCL2 associated athanogene 6.
    
 
 0.761
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.