Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eif1adEukaryotic translation initiation factor 1A domain containing. (180 aa)    
Predicted Functional Partners:
lrrc47
Leucine rich repeat containing 47.
   
 
 0.928
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.878
ENSAPOP00000011131
Uncharacterized protein.
    
 
 0.862
ENSAPOP00000012859
RIO kinase 1 (yeast).
    
 
 0.862
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.842
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.841
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.835
ENSAPOP00000025223
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.829
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
   0.801
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.800
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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