STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eif1adEukaryotic translation initiation factor 1A domain containing. (180 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.993
lrrc47
Leucine rich repeat containing 47.
   
 
 0.918
ENSAPOP00000011131
Uncharacterized protein.
   
 
 0.912
ENSAPOP00000012859
RIO kinase 1 (yeast).
   
 
 0.912
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.907
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.907
rack1
Receptor for activated C kinase 1.
    
   0.850
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.850
rps16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
    
   0.848
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.847
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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