Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110963393Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
LOC110956416
Uncharacterized protein.
    
 0.898
LYPD6
LY6/PLAUR domain containing 6.
    
 0.894
LOC110952384
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
 0.890
LOC110962971
Cholinergic receptor, nicotinic, alpha 4b.
    
 0.890
LOC110962242
Cholinergic receptor, nicotinic, beta 4 (neuronal).
    
 0.787
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
    
 0.743
LOC110963391
Uncharacterized protein.
    
 0.743
LOC110946686
Cholinergic receptor, nicotinic, epsilon.
    
 0.736
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
    
 0.736
LOC110948184
Cholinergic receptor, nicotinic, beta 5b.
    
 0.736
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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