Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000006893Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
ENSAPOP00000017200
Uncharacterized protein.
 
    0.925
net1
Neuroepithelial cell transforming 1.
    
 0.711
arhgef3
Rho guanine nucleotide exchange factor (GEF) 3.
    
 0.711
LOC110967400
Uncharacterized protein.
    
 0.711
LOC110949649
Rho guanine nucleotide exchange factor (GEF) 3, like.
    
 0.711
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.688
pold1
DNA polymerase.
    
 0.673
fancm
Helicase C-terminal domain-containing protein.
    
 0.644
ENSAPOP00000011687
Helicase ATP-binding domain-containing protein.
    
 0.644
DDX20
DEAD-box helicase 20.
   
 0.634
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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