Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948795Zgc:165604. (362 aa)    
Predicted Functional Partners:
vsir
V-set immunoregulatory receptor.
     
  0.873
igsf11
Immunoglobulin superfamily member 11.
     
  0.873
LOC110968908
Tetraspanin.
      
 0.648
LOC110950617
Solute carrier family 37 member 4b.
      
 0.531
slc37a4
Solute carrier family 37 member 4a.
      
 0.531
LOC110953331
Tetraspanin.
      
 0.420
LOC110958690
Glutathione S-transferase mu, tandem duplicate 1.
      
 0.411
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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