STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110963394Uncharacterized protein. (508 aa)    
Predicted Functional Partners:
LOC110962971
Cholinergic receptor, nicotinic, alpha 4b.
  
 
0.796
LOC110972149
Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.741
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.740
LOC110956416
Uncharacterized protein.
  
 
0.717
chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
0.703
LOC110952384
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
 
0.702
LOC110969972
Uncharacterized protein.
  
 
0.674
LOC110954784
Uncharacterized protein.
  
 
0.673
LOC110957914
Uncharacterized protein.
  
 
0.672
LOC110955215
Si:ch211-39a7.1.
  
 
0.671
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.