Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxf2Forkhead box F2b. (381 aa)    
Predicted Functional Partners:
ipo5
Karyopherin (importin) beta 3.
    
  0.749
kpnb1
Karyopherin (importin) beta 1.
    
  0.736
suox
Sulfite oxidase.
     
  0.716
ipo11
Importin 11.
     
  0.716
tnpo3
Transportin 3.
     
  0.716
ipo9
Importin 9.
     
  0.716
ipo7
Importin 7.
    
  0.699
ipo8
Importin 8.
    
  0.699
LOC110952305
Importin 13.
     
  0.697
LOC110950751
Si:ch73-182a11.2.
     
  0.697
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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