STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptrh2Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.739
LOC110968698
Uncharacterized protein.
    
  0.739
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
  0.695
vdac1
Voltage-dependent anion channel 1.
   
 
  0.599
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.598
fkbp8
Peptidylprolyl isomerase.
    
  0.582
LOC110949359
Peptidylprolyl isomerase.
    
  0.582
nup155
Nucleoporin 155.
    
  0.576
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 
 0.544
LOC110969212
Translocase of outer mitochondrial membrane 20b.
   
 
 0.544
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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