Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pllpPlasmolipin. (179 aa)    
Predicted Functional Partners:
cmtm7
MARVEL domain-containing protein.
      
 0.706
LOC110955785
MARVEL domain-containing protein.
      
 0.692
cmtm4
CKLF-like MARVEL transmembrane domain containing 4.
      
 0.675
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.655
tpd52
Tumor protein D52.
    
 
 0.638
LOC110972170
Mal, T cell differentiation protein a.
   
  
 0.598
LOC110948210
MARVEL domain-containing protein.
   
  
 0.598
LOC110948212
Mal, T cell differentiation protein b.
   
  
 0.598
LOC110965245
Microtubule-associated protein 1 light chain 3 gamma.
      
 0.591
LOC110946894
Proteolipid protein 1b.
   
  
 0.581
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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