Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
LOC110952183Akirin 2. (179 aa)    
Predicted Functional Partners:
akirin1
Akirin 1.
   
   0.913
ipo9
Importin 9.
    
 
 0.860
psma5
Proteasome subunit alpha type.
   
   0.821
psmb2
Proteasome subunit beta.
    
   0.820
psma3
Proteasome subunit alpha type.
    
   0.819
psma2
Proteasome subunit alpha type.
   
   0.819
smarcd1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
    
 
 0.805
smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
    
 
 0.805
LOC110955445
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
 
 0.805
adgrd1
Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.792
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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