Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1441 aa)    
Predicted Functional Partners:
rgp1
GP1 homolog, RAB6A GEF complex partner 1.
    
 0.999
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.976
LOC110968455
RAB33B, member RAS oncogene family a.
    
 0.962
LOC110951711
RAB6A, member RAS oncogene family.
   
 0.935
LOC110958429
RAB6B, member RAS oncogene family.
   
 0.935
LOC110962527
Uncharacterized protein.
   
 0.935
rab6b
RAB6B, member RAS oncogene family a.
   
 0.935
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.915
LOC110960775
RAB34, member RAS oncogene family b.
   
 0.909
LOC110961842
RAB36, member RAS oncogene family.
   
 0.909
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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