Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110951142SH3 domain binding glutamate-rich protein like 3. (92 aa)    
Predicted Functional Partners:
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
    0.659
asb8
Ankyrin repeat and SOCS box containing 8.
    
 
 0.645
tmem192
Transmembrane protein 192.
   
  
 0.539
LOC110949433
Uncharacterized protein.
    
 
 0.518
LOC110957159
RAB27B, member RAS oncogene family.
    
 
 0.518
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.518
LOC110967206
Pantothenate kinase 2.
      
 0.493
LOC110948215
Uncharacterized protein.
      
 0.493
ENSAPOP00000028498
Protein kinase domain-containing protein.
      
 0.467
tbck
TBC1 domain containing kinase.
      
 0.467
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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