STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts13Peptidase M12B domain-containing protein. (1389 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
     
 0.601
ENSAPOP00000004347
Sphingomyelin phosphodiesterase 3, neutral.
     
 0.511
LOC110955236
Beta 3-glucosyltransferase a.
    
 0.451
LOC110953189
Beta 3-glucosyltransferase.
    
 0.451
LOC110951654
Otogelin.
    
 0.449
sspo
Subcommissural organ spondin.
    
0.449
vwf
Von Willebrand factor.
    
 0.449
otogl
Otogelin-like.
    
 0.449
cfp
Uncharacterized protein.
   
 
0.445
ENSAPOP00000003553
VWFD domain-containing protein.
    
 0.423
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.