Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSAPOP00000007082Ig-like domain-containing protein. (142 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
  0.682
LOC110954531
Vav 3 guanine nucleotide exchange factor b.
    
 0.573
ntng1
Netrin g1a.
    
 0.573
LOC110958732
Uncharacterized protein.
   
  0.523
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
  0.521
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
  0.521
LOC110961450
Relaxin family peptide receptor 2a.
    
  0.521
rxfp1
Relaxin family peptide receptor 1.
    
  0.521
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.498
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.498
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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