STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110947419Si:ch73-335l21.4. (191 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.543
zfand4
Zinc finger, AN1-type domain 4.
    
  0.490
tonsl
Tonsoku-like, DNA repair protein.
    
  0.484
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.476
ENSAPOP00000001284
Ubiquitin-like domain-containing protein.
    
  0.474
ENSAPOP00000003574
Uncharacterized protein.
    
  0.474
LOC110972273
Ubiquitin-like domain-containing protein.
    
  0.474
ENSAPOP00000003675
Ubiquitin-like domain-containing protein.
    
  0.474
LOC110954209
Uncharacterized protein.
    
  0.474
ubl4a
Ubiquitin like 4A.
    
  0.474
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.