Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
c1qtnf4C1q and TNF related 4. (389 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.735
ENSAPOP00000028898
Uncharacterized protein.
    
  0.735
ENSAPOP00000009502
Ankyrin repeat domain 24.
    
 0.670
ENSAPOP00000027327
Uncharacterized protein.
    
 0.670
pla2g4a
Phospholipase A2.
     
 0.617
fam135a
Family with sequence similarity 135 member A.
      
 0.558
dctn5
Dynactin 5.
      
 0.546
GPR149
G protein-coupled receptor 149.
    
 0.531
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.530
rreb1
Ras responsive element binding protein 1a.
    
 0.520
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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