Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110960418Protein yippee-like; Belongs to the yippee family. (119 aa)    
Predicted Functional Partners:
armc8
Armadillo repeat containing 8.
    
 0.873
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.813
WDR26
WD repeat domain 26a.
   
 
 0.804
LOC110967218
WD repeat domain 26b.
   
 
 0.804
LOC110946351
GID complex subunit 8 homolog.
   
 
 0.768
LOC110949807
GID complex subunit 8 homolog b (S. cerevisiae).
   
 
 0.768
ranbp10
RAN binding protein 10.
   
 
 0.740
LOC110971562
RAN binding protein 9.
   
 
 0.740
maea
Macrophage erythroblast attacher.
    
 
 0.705
spryd3
B30.2/SPRY domain-containing protein.
   
 
 0.628
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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