STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110958546Si:dkey-71h2.2. (307 aa)    
Predicted Functional Partners:
ldlr
Low density lipoprotein receptor a.
    
  0.901
LOC110948877
Low density lipoprotein receptor b.
    
  0.901
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.881
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.881
LOC110961302
Low density lipoprotein receptor adaptor protein 1a.
     
  0.873
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
     
  0.873
dab2
DAB adaptor protein 2.
     
  0.873
LOC110958101
Si:dkey-19b23.8.
     
  0.873
vldlr
Very low density lipoprotein receptor.
    
  0.862
LOC110950754
Uncharacterized protein.
    
  0.862
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.