STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961617Uncharacterized protein. (467 aa)    
Predicted Functional Partners:
LOC110971509
Uncharacterized protein.
   
 0.750
LOC110971507
Uncharacterized protein.
   
 0.750
cd81
Tetraspanin.
    
 0.733
LOC110961812
Tetraspanin.
    
 0.733
ENSAPOP00000000458
Uncharacterized protein.
   
 0.681
LOC110970860
Uncharacterized protein.
   
 0.681
ENSAPOP00000005415
Anaphylatoxin-like domain-containing protein.
   
 0.681
ENSAPOP00000005425
Uncharacterized protein.
   
 0.681
LOC110967542
Complement 4B (Chido blood group).
   
 0.681
ENSAPOP00000006271
Uncharacterized protein.
   
 0.681
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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