Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959234Ubiquitin domain containing 2. (272 aa)    
Predicted Functional Partners:
otub1
Ubiquitin thioesterase.
    
 
 0.729
LOC110960545
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
     
  0.716
IL12B
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
     
  0.697
LOC110965106
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
     
  0.697
yod1
YOD1 deubiquitinase.
      
 0.660
LOC110972875
Uncharacterized protein.
     
  0.652
LOC110972676
Interleukin-12 subunit alpha-like.
     
  0.652
LOC110951755
Uncharacterized protein.
     
  0.652
il6st
Uncharacterized protein.
     
  0.591
LOC110966260
Uncharacterized protein.
     
  0.591
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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