Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
efcab14Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
LOC110966957
GRAM domain-containing protein.
   
   0.763
gramd2b
GRAM domain-containing protein.
   
   0.763
cacul1
CDK2 associated cullin domain 1; Belongs to the cullin family.
      
 0.669
stil
STIL centriolar assembly protein.
      
 0.650
unc80
Unc-80 homolog (C. elegans).
      
 0.528
LOC110962791
Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.
    
   0.480
LOC110970597
Zgc:86598; Belongs to the protein kinase superfamily.
    
   0.480
LOC110956871
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.480
LOC110964146
Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.
    
   0.480
LOC110959322
Carboxypeptidase N, polypeptide 1.
      
 0.468
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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