Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JMJD8Jumonji domain containing 8. (282 aa)    
Predicted Functional Partners:
etf1
Eukaryotic translation termination factor 1b.
    
 0.928
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
     
  0.854
nprl3
NPR3-like, GATOR1 complex subunit.
     
  0.854
nprl2
NPR2 like, GATOR1 complex subunit.
     
  0.854
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
     
  0.854
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
     
  0.854
LOC110961831
Uncharacterized protein.
   
 
  0.814
depdc5
DEP domain containing 5.
   
 
  0.814
tyw5
tRNA-yW synthesizing protein 5.
      
 0.687
LOC110956830
Methyltranfer_dom domain-containing protein.
     
  0.661
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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