Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000007436Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.735
ENSAPOP00000028898
Uncharacterized protein.
    
  0.735
pla2g4a
Phospholipase A2.
     
  0.607
ENSAPOP00000016008
PDZ domain-containing protein.
     
  0.468
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.468
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.437
LOC110970376
SET domain-containing protein.
    
  0.437
tep1
Uncharacterized protein.
    
 0.431
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.423
C1QC
Complement C1q C chain.
   
  0.422
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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