Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110951110Chemokine (C motif) receptor 1b, duplicate 1; Belongs to the G-protein coupled receptor 1 family. (354 aa)    
Predicted Functional Partners:
LOC110952001
Collectin sub-family member 12.
   
   0.919
ENSAPOP00000004694
Uncharacterized protein.
    
 0.898
LOC110955576
Chemokine (C-C motif) ligand 25b.
    
 0.893
LOC110948074
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.889
cxcl12
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.889
ENSAPOP00000005668
SCY domain-containing protein.
    
 0.876
xcr1
Chemokine (C motif) receptor 1a, duplicate 1; Belongs to the G-protein coupled receptor 1 family.
     
  0.873
cxcl14
Chemokine (C-X-C motif) ligand 14.
     
 0.873
LOC110956524
SCY domain-containing protein.
    
  0.871
LOC110946148
Chemokine (C-C motif) receptor 12a; Belongs to the G-protein coupled receptor 1 family.
     
  0.860
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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