Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000007510Leucine-rich repeats and calponin homology (CH) domain containing 2. (308 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.617
ENSAPOP00000028898
Uncharacterized protein.
    
  0.617
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
  
 
  0.567
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
  
 
  0.556
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.532
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
  0.532
lrrc20
Leucine rich repeat containing 20.
  
     0.524
prelp
Proline/arginine-rich end leucine-rich repeat protein.
  
     0.509
dcn
Decorin; May affect the rate of fibrils formation.
  
     0.504
LOC110954531
Vav 3 guanine nucleotide exchange factor b.
    
  0.503
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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