Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110960409Uncharacterized protein. (1042 aa)    
Predicted Functional Partners:
PCDH20
Protocadherin 20.
    
  0.954
PCDH9
Protocadherin 9.
     
 0.727
ENSAPOP00000013792
Uncharacterized protein.
     
 0.727
LOC110947684
Protocadherin 11.
     
 0.727
fjx1
Four-jointed box kinase 1.
   
 0.599
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
     
 0.573
vamp3
V-SNARE coiled-coil homology domain-containing protein.
     
  0.563
LOC110959321
Integrin beta; Belongs to the integrin beta chain family.
    
 0.558
LOC110965159
Integrin beta; Belongs to the integrin beta chain family.
    
 0.558
LOC110950824
Integrin beta; Belongs to the integrin beta chain family.
    
 0.558
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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