Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110956920FBA domain-containing protein. (274 aa)    
Predicted Functional Partners:
fbxo4
F-box protein 4.
     
 0.918
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.918
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.911
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
     
 0.907
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.904
LOC110951274
Zgc:175088.
     
  0.873
fbxw11
F-box and WD repeat domain containing 11a.
     
 0.865
cops2
COP9 signalosome subunit 2.
    
  0.776
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.768
LOC110957450
Uncharacterized protein.
    
 0.740
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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