STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110965207PALM2-AKAP2 fusion. (862 aa)    
Predicted Functional Partners:
palm2
Uncharacterized protein.
 
    
 0.804
synm
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
  
   
 0.553
LOC110962897
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 
 0.485
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
    
 
 0.485
LOC110966030
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.485
ENSAPOP00000025798
Protein kinase, cAMP-dependent, catalytic, beta a; Belongs to the protein kinase superfamily.
    
 
 0.485
LOC110966408
Uncharacterized protein.
      
 0.475
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
      
 0.463
prkx
Protein kinase X-linked; Belongs to the protein kinase superfamily.
    
 
 0.453
rnaseh1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
      
 0.406
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.