STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110968142Cholinergic receptor, nicotinic, beta 1 (muscle) like. (452 aa)    
Predicted Functional Partners:
LOC110972149
Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.820
LOC110962971
Cholinergic receptor, nicotinic, alpha 4b.
  
 
 
0.800
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.738
LOC110952384
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
 
0.704
LOC110956416
Uncharacterized protein.
  
 
 
0.702
LOC110969972
Uncharacterized protein.
  
 
0.672
LOC110955215
Si:ch211-39a7.1.
  
 
0.671
LOC110957914
Uncharacterized protein.
  
 
0.670
LOC110956564
Uncharacterized protein.
   
 
0.661
LOC110968840
Uncharacterized protein.
   
 
0.661
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.