STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhdc1FH2 domain containing 1. (888 aa)    
Predicted Functional Partners:
LOC110964039
FH2 domain-containing protein.
 
      0.884
pfn2
Profilin; Belongs to the profilin family.
    
 0.780
LOC110964531
Profilin; Belongs to the profilin family.
    
 0.780
RND1
Rho family GTPase 1.
    
 0.707
LOC110958078
Ras homolog family member Ca.
    
 0.707
LOC110958602
Rho family GTPase 1b.
    
 0.707
LOC110964518
Uncharacterized protein.
    
 0.707
RHOB
Ras homolog family member B.
    
 0.707
LOC110949650
Uncharacterized protein.
    
 0.707
LOC110959450
Uncharacterized protein.
    
 0.707
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.