Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cherpCalcium homeostasis endoplasmic reticulum protein. (565 aa)    
Predicted Functional Partners:
LOC110962838
Zgc:163098.
   
 0.989
u2surp
U2 snRNP-associated SURP domain containing.
   
 0.989
rbm17
RNA binding motif protein 17.
   
 0.985
sf3a2
Splicing factor 3a, subunit 2.
   
 0.981
sf3a1
Splicing factor 3a, subunit 1.
   
 0.964
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.955
sf3b4
Splicing factor 3b, subunit 4.
   
 0.954
DHX15
DEAH-box helicase 15.
   
 0.949
LOC110952590
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.949
sf3a3
Splicing factor 3a, subunit 3.
   
 0.929
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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